IL_9P7E_271

3D structure

PDB id

9P7E (explore in PDB, NAKB, or RNA 3D Hub)

Description

In situ human Hibernating class5 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.59 Å

Loop

Sequence

CCCCG*CGGAGCG

Length

12 nucleotides

Bulged bases

9P7E|1|S2|C|1753, 9P7E|1|S2|C|1783

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9P7E|1|S2|C|1750
9P7E|1|S2|C|1751
9P7E|1|S2|C|1752
9P7E|1|S2|C|1753
9P7E|1|S2|G|1754
*
9P7E|1|S2|C|1778
9P7E|1|S2|G|1779
9P7E|1|S2|G|1780
9P7E|1|S2|A|1781
9P7E|1|S2|G|1782
9P7E|1|S2|C|1783
9P7E|1|S2|G|1784

Current chains

Chain S2

18S rRNA

Nearby chains

Chain LW

Ribosomal protein L24