IL_9P7G_018

3D structure

PDB id

9P7G (explore in PDB, NAKB, or RNA 3D Hub)

Description

In situ HHT and CHX treated A-P-Z state 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.54 Å

Loop

Sequence

GUGAAAC*GUGGAUC

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9P7G|1|L5|G|415
9P7G|1|L5|U|416
9P7G|1|L5|G|417
9P7G|1|L5|A|418
9P7G|1|L5|A|419
9P7G|1|L5|A|420
9P7G|1|L5|C|421
*
9P7G|1|L8|G|13
9P7G|1|L8|U|14
9P7G|1|L8|G|15
9P7G|1|L8|G|16
9P7G|1|L8|A|17
9P7G|1|L8|U|18
9P7G|1|L8|C|19

Current chains

Chain L5

28S rRNA [Homo sapiens]

Chain L8

5.8S rRNA [Homo sapiens]

Nearby chains

Chain LC

60S ribosomal protein L4

Chain LP

60S ribosomal protein L17

Chain Le

60S ribosomal protein L32