IL_9P7G_113

3D structure

PDB id

9P7G (explore in PDB, NAKB, or RNA 3D Hub)

Description

In situ HHT and CHX treated A-P-Z state 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.54 Å

Loop

Sequence

GGGUC*GGCGCCUAGC

Length

15 nucleotides

Bulged bases

9P7G|1|L5|G|2903, 9P7G|1|L5|A|3596

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9P7G|1|L5|G|2901
9P7G|1|L5|G|2902
9P7G|1|L5|G|2903
9P7G|1|L5|U|2904
9P7G|1|L5|C|2905
*
9P7G|1|L5|G|3589
9P7G|1|L5|G|3590
9P7G|1|L5|C|3591
9P7G|1|L5|G|3592
9P7G|1|L5|C|3593
9P7G|1|L5|C|3594
9P7G|1|L5|U|3595
9P7G|1|L5|A|3596
9P7G|1|L5|G|3597
9P7G|1|L5|C|3598

Current chains

Chain L5

28S rRNA [Homo sapiens]

Nearby chains

Chain LR

60S ribosomal protein L19