IL_9P7G_161
3D structure
- PDB id
- 9P7G (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- In situ HHT and CHX treated A-P-Z state 80S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.54 Å
Loop
- Sequence
- GAAACG*CUCGC
- Length
- 11 nucleotides
- Bulged bases
- 9P7G|1|L5|C|4895
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9P7G_161 not in the Motif Atlas
- Homologous match to IL_8GLP_171
- Geometric discrepancy: 0.3903
- The information below is about IL_8GLP_171
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9P7G|1|L5|G|4891
9P7G|1|L5|A|4892
9P7G|1|L5|A|4893
9P7G|1|L5|A|4894
9P7G|1|L5|C|4895
9P7G|1|L5|G|4896
*
9P7G|1|L5|C|4924
9P7G|1|L5|U|4925
9P7G|1|L5|C|4926
9P7G|1|L5|G|4927
9P7G|1|L5|C|4928
Current chains
- Chain L5
- 28S rRNA [Homo sapiens]
Nearby chains
- Chain LM
- 60S ribosomal protein L14
- Chain LO
- 60S ribosomal protein L13a
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