IL_9P7H_182
3D structure
- PDB id
- 9P7H (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- In situ HHT and CHX treated human eEF1A-A/T-P state 80S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.68 Å
Loop
- Sequence
- CAAA*UGA(OMC)G
- Length
- 9 nucleotides
- Bulged bases
- 9P7H|1|S2|A|516
- QA status
- Modified nucleotides: OMC
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9P7H_182 not in the Motif Atlas
- Geometric match to IL_8GLP_190
- Geometric discrepancy: 0.1014
- The information below is about IL_8GLP_190
- Detailed Annotation
- Double sheared
- Broad Annotation
- Double sheared
- Motif group
- IL_58355.5
- Basepair signature
- cWW-tSH-tHS-cWW
- Number of instances in this motif group
- 50
Unit IDs
9P7H|1|S2|C|37
9P7H|1|S2|A|38
9P7H|1|S2|A|39
9P7H|1|S2|A|40
*
9P7H|1|S2|U|514
9P7H|1|S2|G|515
9P7H|1|S2|A|516
9P7H|1|S2|OMC|517
9P7H|1|S2|G|518
Current chains
- Chain S2
- 18S rRNA [Homo sapiens]
Nearby chains
- Chain CF
- Elongation factor 1-alpha 1
- Chain SE
- Small ribosomal subunit protein eS4, X isoform
- Chain SJ
- 40S ribosomal protein S9
- Chain SY
- 40S ribosomal protein S24
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