IL_9P7K_055
3D structure
- PDB id
- 9P7K (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- In situ human post eEF1A-A/T-P-E state 80S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.8 Å
Loop
- Sequence
- CGC*GG
- Length
- 5 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9P7K_055 not in the Motif Atlas
- Homologous match to IL_8GLP_054
- Geometric discrepancy: 0.0601
- The information below is about IL_8GLP_054
- Detailed Annotation
- Single stack bend
- Broad Annotation
- No text annotation
- Motif group
- IL_15011.6
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 59
Unit IDs
9P7K|1|L5|C|1474
9P7K|1|L5|G|1475
9P7K|1|L5|C|1476
*
9P7K|1|L5|G|1489
9P7K|1|L5|G|1490
Current chains
- Chain L5
- 28S rRNA
Nearby chains
- Chain LL
- Large ribosomal subunit protein eL13
- Chain La
- 60S ribosomal protein L27a
- Chain Lb
- Large ribosomal subunit protein eL29
- Chain Lo
- 60S ribosomal protein L36a
Coloring options: