3D structure

PDB id
9P7N (explore in PDB, NAKB, or RNA 3D Hub)
Description
In situ human Post-eEF1A-A/T-P-Z state 80S ribosome
Experimental method
ELECTRON MICROSCOPY
Resolution
2.83 Å

Loop

Sequence
GAAAAAA(PSU)U*ACCGCAGC
Length
17 nucleotides
Bulged bases
None detected
QA status
Modified nucleotides: PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9P7N|1|S2|G|807
9P7N|1|S2|A|808
9P7N|1|S2|A|809
9P7N|1|S2|A|810
9P7N|1|S2|A|811
9P7N|1|S2|A|812
9P7N|1|S2|A|813
9P7N|1|S2|PSU|814
9P7N|1|S2|U|815
*
9P7N|1|S2|A|849
9P7N|1|S2|C|850
9P7N|1|S2|C|851
9P7N|1|S2|G|852
9P7N|1|S2|C|853
9P7N|1|S2|A|854
9P7N|1|S2|G|855
9P7N|1|S2|C|856

Current chains

Chain S2
18S rRNA

Nearby chains

Chain SE
Small ribosomal subunit protein eS4, X isoform
Chain SJ
40S ribosomal protein S9
Chain SL
40S ribosomal protein S11
Chain SW
40S ribosomal protein S15a

Coloring options:

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