3D structure

PDB id
9P7O (explore in PDB, NAKB, or RNA 3D Hub)
Description
In situ human AT-P-Z state ribosome
Experimental method
ELECTRON MICROSCOPY
Resolution
2.65 Å

Loop

Sequence
GCUCGUGG*CGGC
Length
12 nucleotides
Bulged bases
9P7O|1|L5|C|183, 9P7O|1|L5|C|185, 9P7O|1|L5|G|188
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9P7O|1|L5|G|182
9P7O|1|L5|C|183
9P7O|1|L5|U|184
9P7O|1|L5|C|185
9P7O|1|L5|G|186
9P7O|1|L5|U|187
9P7O|1|L5|G|188
9P7O|1|L5|G|189
*
9P7O|1|L5|C|252
9P7O|1|L5|G|253
9P7O|1|L5|G|254
9P7O|1|L5|C|255

Current chains

Chain L5
28S rRNA

Nearby chains

Chain L8
5.8S ribosomal RNA; 5.8S rRNA
Chain LC
60S ribosomal protein L4
Chain LL
Large ribosomal subunit protein eL13
Chain Lh
60S ribosomal protein L35
Chain Lj
60S ribosomal protein L37

Coloring options:

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