IL_9P7X_161
3D structure
- PDB id
- 9P7X (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- In situ human A-P-Z state 80S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.83 Å
Loop
- Sequence
- UCCUG*CGUCA
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9P7X_161 not in the Motif Atlas
- Homologous match to IL_8GLP_170
- Geometric discrepancy: 0.0822
- The information below is about IL_8GLP_170
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_21086.2
- Basepair signature
- cWW-L-R-L-R-L-R-cWW
- Number of instances in this motif group
- 2
Unit IDs
9P7X|1|L5|U|4885
9P7X|1|L5|C|4886
9P7X|1|L5|C|4887
9P7X|1|L5|U|4888
9P7X|1|L5|G|4889
*
9P7X|1|L5|C|4930
9P7X|1|L5|G|4931
9P7X|1|L5|U|4932
9P7X|1|L5|C|4933
9P7X|1|L5|A|4934
Current chains
- Chain L5
- 28S rRNA
Nearby chains
- Chain LE
- Large ribosomal subunit protein eL6
- Chain LM
- 60S ribosomal protein L14
- Chain LO
- 60S ribosomal protein L13a
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