IL_9P7X_203
3D structure
- PDB id
- 9P7X (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- In situ human A-P-Z state 80S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.83 Å
Loop
- Sequence
- GGA*UAC
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9P7X_203 not in the Motif Atlas
- Homologous match to IL_9PN5_162
- Geometric discrepancy: 0.12
- The information below is about IL_9PN5_162
- Detailed Annotation
- Isolated cWH basepair
- Broad Annotation
- No text annotation
- Motif group
- IL_10892.5
- Basepair signature
- cWW-cHW-cWW
- Number of instances in this motif group
- 67
Unit IDs
9P7X|1|S2|G|437
9P7X|1|S2|G|438
9P7X|1|S2|A|439
*
9P7X|1|S2|U|454
9P7X|1|S2|A|455
9P7X|1|S2|C|456
Current chains
- Chain S2
- 18S rRNA
Nearby chains
- Chain LW
- Ribosomal protein L24
- Chain SG
- 40S ribosomal protein S6
- Chain SI
- 40S ribosomal protein S8
Coloring options: