IL_9P9H_168

3D structure

PDB id

9P9H (explore in PDB, NAKB, or RNA 3D Hub)

Description

In situ human unrotated hibernating with CCDC124 state 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.84 Å

Loop

Sequence

UCGUACG*UUGAAA

Length

13 nucleotides

Bulged bases

9P9H|1|L5|G|5041

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9P9H|1|L5|U|5003
9P9H|1|L5|C|5004
9P9H|1|L5|G|5005
9P9H|1|L5|U|5006
9P9H|1|L5|A|5007
9P9H|1|L5|C|5008
9P9H|1|L5|G|5009
*
9P9H|1|L5|U|5039
9P9H|1|L5|U|5040
9P9H|1|L5|G|5041
9P9H|1|L5|A|5042
9P9H|1|L5|A|5043
9P9H|1|L5|A|5044

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LB

Large ribosomal subunit protein uL3

Chain LW

Ribosomal protein L24

Chain Ld

60S ribosomal protein L31