3D structure

PDB id
9P9H (explore in PDB, NAKB, or RNA 3D Hub)
Description
In situ human unrotated hibernating with CCDC124 state 80S ribosome
Experimental method
ELECTRON MICROSCOPY
Resolution
2.84 Å

Loop

Sequence
CGGGG*CAAG
Length
9 nucleotides
Bulged bases
9P9H|1|S2|G|933
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9P9H|1|S2|C|931
9P9H|1|S2|G|932
9P9H|1|S2|G|933
9P9H|1|S2|G|934
9P9H|1|S2|G|935
*
9P9H|1|S2|C|1007
9P9H|1|S2|A|1008
9P9H|1|S2|A|1009
9P9H|1|S2|G|1010

Current chains

Chain S2
18S rRNA

Nearby chains

Chain Lc
60S ribosomal protein L30
Chain SB
40S ribosomal protein S3a
Chain SN
40S ribosomal protein S13
Chain Sa
40S ribosomal protein S26

Coloring options:

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