IL_9P9K_117

3D structure

PDB id

9P9K (explore in PDB, NAKB, or RNA 3D Hub)

Description

In situ human 60S ribosome with EIF6

Experimental method

ELECTRON MICROSCOPY

Resolution

2.96 Å

Loop

Sequence

CUGAAUG*CGCG

Length

11 nucleotides

Bulged bases

9P9K|1|L5|A|3712

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9P9K|1|L5|C|3708
9P9K|1|L5|U|3709
9P9K|1|L5|G|3710
9P9K|1|L5|A|3711
9P9K|1|L5|A|3712
9P9K|1|L5|U|3713
9P9K|1|L5|G|3714
*
9P9K|1|L5|C|3739
9P9K|1|L5|G|3740
9P9K|1|L5|C|3741
9P9K|1|L5|G|3742

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LA

60S ribosomal protein L8