3D structure

PDB id
9PG8 (explore in PDB, NAKB, or RNA 3D Hub)
Description
In situ structure of the human mitoribosome in the P-E state
Experimental method
ELECTRON MICROSCOPY
Resolution
3.06 Å

Loop

Sequence
GCCCA*UACCCUCAC
Length
14 nucleotides
Bulged bases
9PG8|1|A|C|2414, 9PG8|1|A|C|2415
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9PG8|1|A|G|2377
9PG8|1|A|C|2378
9PG8|1|A|C|2379
9PG8|1|A|C|2380
9PG8|1|A|A|2381
*
9PG8|1|A|U|2411
9PG8|1|A|A|2412
9PG8|1|A|C|2413
9PG8|1|A|C|2414
9PG8|1|A|C|2415
9PG8|1|A|U|2416
9PG8|1|A|C|2417
9PG8|1|A|A|2418
9PG8|1|A|C|2419

Current chains

Chain A
16S mitochondrial rRNA

Nearby chains

Chain 5
39S ribosomal protein L37, mitochondrial
Chain 9
39S ribosomal protein L41, mitochondrial
Chain U
39S ribosomal protein L23, mitochondrial
Chain s
39S ribosomal protein S30, mitochondrial

Coloring options:

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