IL_9PG8_035

3D structure

PDB id

9PG8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

In situ structure of the human mitoribosome in the P-E state

Experimental method

ELECTRON MICROSCOPY

Resolution

3.06 Å

Loop

Sequence

CAUAAUCACUUG*CCUG

Length

16 nucleotides

Bulged bases

9PG8|1|A|A|2601, 9PG8|1|A|U|2607, 9PG8|1|A|U|2626

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9PG8|1|A|C|2597
9PG8|1|A|A|2598
9PG8|1|A|U|2599
9PG8|1|A|A|2600
9PG8|1|A|A|2601
9PG8|1|A|U|2602
9PG8|1|A|C|2603
9PG8|1|A|A|2604
9PG8|1|A|C|2605
9PG8|1|A|U|2606
9PG8|1|A|U|2607
9PG8|1|A|G|2608
*
9PG8|1|A|C|2624
9PG8|1|A|C|2625
9PG8|1|A|U|2626
9PG8|1|A|G|2627

Current chains

Chain A

16S mitochondrial rRNA

Nearby chains

Chain A3

Aurora kinase A-interacting protein

Chain AA

Small subunit ribosomal RNA; SSU rRNA