IL_9PG8_042

3D structure

PDB id

9PG8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

In situ structure of the human mitoribosome in the P-E state

Experimental method

ELECTRON MICROSCOPY

Resolution

3.06 Å

Loop

Sequence

UACCUAACAAA*UCCUAAACUA

Length

21 nucleotides

Bulged bases

9PG8|1|A|C|2762, 9PG8|1|A|U|2763, 9PG8|1|A|A|2764, 9PG8|1|A|A|2767, 9PG8|1|A|C|2780, 9PG8|1|A|U|2781, 9PG8|1|A|A|2782

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9PG8|1|A|U|2759
9PG8|1|A|A|2760
9PG8|1|A|C|2761
9PG8|1|A|C|2762
9PG8|1|A|U|2763
9PG8|1|A|A|2764
9PG8|1|A|A|2765
9PG8|1|A|C|2766
9PG8|1|A|A|2767
9PG8|1|A|A|2768
9PG8|1|A|A|2769
*
9PG8|1|A|U|2778
9PG8|1|A|C|2779
9PG8|1|A|C|2780
9PG8|1|A|U|2781
9PG8|1|A|A|2782
9PG8|1|A|A|2783
9PG8|1|A|A|2784
9PG8|1|A|C|2785
9PG8|1|A|U|2786
9PG8|1|A|A|2787

Current chains

Chain A

16S mitochondrial rRNA

Nearby chains

Chain H

39S ribosomal protein L9, mitochondrial

Chain z

Large ribosomal subunit protein uL1m