IL_9PGF_024

3D structure

PDB id

9PGF (explore in PDB, NAKB, or RNA 3D Hub)

Description

In situ structure of the human mitoribosome in the P state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.93 Å

Loop

Sequence

AUCUACAAUCAACCAAC*GUCAUU

Length

23 nucleotides

Bulged bases

9PGF|1|A|C|2393, 9PGF|1|A|A|2406

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9PGF|1|A|A|2384
9PGF|1|A|U|2385
9PGF|1|A|C|2386
9PGF|1|A|U|2387
9PGF|1|A|A|2388
9PGF|1|A|C|2389
9PGF|1|A|A|2390
9PGF|1|A|A|2391
9PGF|1|A|U|2392
9PGF|1|A|C|2393
9PGF|1|A|A|2394
9PGF|1|A|A|2395
9PGF|1|A|C|2396
9PGF|1|A|C|2397
9PGF|1|A|A|2398
9PGF|1|A|A|2399
9PGF|1|A|C|2400
*
9PGF|1|A|G|2403
9PGF|1|A|U|2404
9PGF|1|A|C|2405
9PGF|1|A|A|2406
9PGF|1|A|U|2407
9PGF|1|A|U|2408

Current chains

Chain A

16S mitochondrial rRNA

Nearby chains

Chain 5

39S ribosomal protein L37, mitochondrial

Chain D

39S ribosomal protein L2, mitochondrial

Chain s

39S ribosomal protein S30, mitochondrial