IL_9PGF_042

3D structure

PDB id

9PGF (explore in PDB, NAKB, or RNA 3D Hub)

Description

In situ structure of the human mitoribosome in the P state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.93 Å

Loop

Sequence

UACCUAACAAA*UCCUAAACUA

Length

21 nucleotides

Bulged bases

9PGF|1|A|C|2762, 9PGF|1|A|U|2763, 9PGF|1|A|A|2764, 9PGF|1|A|A|2767, 9PGF|1|A|C|2780, 9PGF|1|A|U|2781, 9PGF|1|A|A|2782

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9PGF|1|A|U|2759
9PGF|1|A|A|2760
9PGF|1|A|C|2761
9PGF|1|A|C|2762
9PGF|1|A|U|2763
9PGF|1|A|A|2764
9PGF|1|A|A|2765
9PGF|1|A|C|2766
9PGF|1|A|A|2767
9PGF|1|A|A|2768
9PGF|1|A|A|2769
*
9PGF|1|A|U|2778
9PGF|1|A|C|2779
9PGF|1|A|C|2780
9PGF|1|A|U|2781
9PGF|1|A|A|2782
9PGF|1|A|A|2783
9PGF|1|A|A|2784
9PGF|1|A|C|2785
9PGF|1|A|U|2786
9PGF|1|A|A|2787

Current chains

Chain A

16S mitochondrial rRNA

Nearby chains

Chain H

39S ribosomal protein L9, mitochondrial