IL_9PGF_079

3D structure

PDB id

9PGF (explore in PDB, NAKB, or RNA 3D Hub)

Description

In situ structure of the human mitoribosome in the P state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.93 Å

Loop

Sequence

UAAAACU*ACACAAA

Length

14 nucleotides

Bulged bases

9PGF|1|AA|C|1011

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9PGF|1|AA|U|974
9PGF|1|AA|A|975
9PGF|1|AA|A|976
9PGF|1|AA|A|977
9PGF|1|AA|A|978
9PGF|1|AA|C|979
9PGF|1|AA|U|980
*
9PGF|1|AA|A|1008
9PGF|1|AA|C|1009
9PGF|1|AA|A|1010
9PGF|1|AA|C|1011
9PGF|1|AA|A|1012
9PGF|1|AA|A|1013
9PGF|1|AA|A|1014

Current chains

Chain AA

12S mitochondrial rRNA

Nearby chains

Chain AE

28S ribosomal protein S6, mitochondrial

Chain AI

28S ribosomal protein S11, mitochondrial

Chain AP

28S ribosomal protein S18c, mitochondrial

Chain AQ

Small ribosomal subunit protein bS21m

Chain D

39S ribosomal protein L2, mitochondrial