IL_9PGI_043

3D structure

PDB id

9PGI (explore in PDB, NAKB, or RNA 3D Hub)

Description

In situ structure of the human mitoribosome in the A-P-E state with TACO1

Experimental method

ELECTRON MICROSCOPY

Resolution

3.02 Å

Loop

Sequence

UACCUAACAAA*UCCUAAACUA

Length

21 nucleotides

Bulged bases

9PGI|1|A|C|2762, 9PGI|1|A|U|2763, 9PGI|1|A|A|2764, 9PGI|1|A|A|2767, 9PGI|1|A|C|2780, 9PGI|1|A|U|2781, 9PGI|1|A|A|2782

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9PGI|1|A|U|2759
9PGI|1|A|A|2760
9PGI|1|A|C|2761
9PGI|1|A|C|2762
9PGI|1|A|U|2763
9PGI|1|A|A|2764
9PGI|1|A|A|2765
9PGI|1|A|C|2766
9PGI|1|A|A|2767
9PGI|1|A|A|2768
9PGI|1|A|A|2769
*
9PGI|1|A|U|2778
9PGI|1|A|C|2779
9PGI|1|A|C|2780
9PGI|1|A|U|2781
9PGI|1|A|A|2782
9PGI|1|A|A|2783
9PGI|1|A|A|2784
9PGI|1|A|C|2785
9PGI|1|A|U|2786
9PGI|1|A|A|2787

Current chains

Chain A

16S mitochondrial rRNA

Nearby chains

Chain H

39S ribosomal protein L9, mitochondrial

Chain z

Large ribosomal subunit protein uL1m