IL_9PGI_108

3D structure

PDB id

9PGI (explore in PDB, NAKB, or RNA 3D Hub)

Description

In situ structure of the human mitoribosome in the A-P-E state with TACO1

Experimental method

ELECTRON MICROSCOPY

Resolution

3.02 Å

Loop

Sequence

CAAA*UACG

Length

8 nucleotides

Bulged bases

9PGI|1|AA|A|1513

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9PGI|1|AA|C|1511
9PGI|1|AA|A|1512
9PGI|1|AA|A|1513
9PGI|1|AA|A|1514
*
9PGI|1|AA|U|1535
9PGI|1|AA|A|1536
9PGI|1|AA|C|1537
9PGI|1|AA|G|1538

Current chains

Chain AA

12S mitochondrial rRNA

Nearby chains

Chain A0

Small ribosomal subunit protein mS34

Chain A3

Aurora kinase A-interacting protein

Chain L

39S ribosomal protein L14, mitochondrial