IL_9PGL_043

3D structure

PDB id

9PGL (explore in PDB, NAKB, or RNA 3D Hub)

Description

In situ structure of the human mitoribosome in the A-P state with TACO1

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

UACCUAACAAA*UCCUAAACUA

Length

21 nucleotides

Bulged bases

9PGL|1|A|C|2762, 9PGL|1|A|U|2763, 9PGL|1|A|A|2764, 9PGL|1|A|A|2767, 9PGL|1|A|C|2780, 9PGL|1|A|U|2781, 9PGL|1|A|A|2782

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9PGL|1|A|U|2759
9PGL|1|A|A|2760
9PGL|1|A|C|2761
9PGL|1|A|C|2762
9PGL|1|A|U|2763
9PGL|1|A|A|2764
9PGL|1|A|A|2765
9PGL|1|A|C|2766
9PGL|1|A|A|2767
9PGL|1|A|A|2768
9PGL|1|A|A|2769
*
9PGL|1|A|U|2778
9PGL|1|A|C|2779
9PGL|1|A|C|2780
9PGL|1|A|U|2781
9PGL|1|A|A|2782
9PGL|1|A|A|2783
9PGL|1|A|A|2784
9PGL|1|A|C|2785
9PGL|1|A|U|2786
9PGL|1|A|A|2787

Current chains

Chain A

16S mitochondrial rRNA

Nearby chains

Chain H

39S ribosomal protein L9, mitochondrial