IL_9PGL_066
3D structure
- PDB id
- 9PGL (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- In situ structure of the human mitoribosome in the A-P state with TACO1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- UCUAAA*UCAAAA
- Length
- 12 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9PGL_066 not in the Motif Atlas
- Geometric match to IL_8P9A_410
- Geometric discrepancy: 0.3096
- The information below is about IL_8P9A_410
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_57885.2
- Basepair signature
- cWW-tSH-tSH-tHS-cWW-cWW
- Number of instances in this motif group
- 7
Unit IDs
9PGL|1|AA|U|727
9PGL|1|AA|C|728
9PGL|1|AA|U|729
9PGL|1|AA|A|730
9PGL|1|AA|A|731
9PGL|1|AA|A|732
*
9PGL|1|AA|U|742
9PGL|1|AA|C|743
9PGL|1|AA|A|744
9PGL|1|AA|A|745
9PGL|1|AA|A|746
9PGL|1|AA|A|747
Current chains
- Chain AA
- 12S mitochondrial rRNA
Nearby chains
- Chain A0
- Small ribosomal subunit protein mS34
- Chain AM
- 28S ribosomal protein S16, mitochondrial
- Chain AN
- 28S ribosomal protein S17, mitochondrial
- Chain AU
- 28S ribosomal protein S26, mitochondrial
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