IL_9PGM_001
3D structure
- PDB id
- 9PGM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- In situ structure of the human mitoribosome in the P-E state from TACO1-knockout cells
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.18 Å
Loop
- Sequence
- CUAAACC*GAUGAAAAAUUAUAACCAAG
- Length
- 27 nucleotides
- Bulged bases
- 9PGM|1|A|A|1804, 9PGM|1|A|U|1807, 9PGM|1|A|A|1808, 9PGM|1|A|C|1813
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9PGM|1|A|C|1672
9PGM|1|A|U|1673
9PGM|1|A|A|1674
9PGM|1|A|A|1675
9PGM|1|A|A|1676
9PGM|1|A|C|1677
9PGM|1|A|C|1678
*
9PGM|1|A|G|1797
9PGM|1|A|A|1798
9PGM|1|A|U|1799
9PGM|1|A|G|1800
9PGM|1|A|A|1801
9PGM|1|A|A|1802
9PGM|1|A|A|1803
9PGM|1|A|A|1804
9PGM|1|A|A|1805
9PGM|1|A|U|1806
9PGM|1|A|U|1807
9PGM|1|A|A|1808
9PGM|1|A|U|1809
9PGM|1|A|A|1810
9PGM|1|A|A|1811
9PGM|1|A|C|1812
9PGM|1|A|C|1813
9PGM|1|A|A|1814
9PGM|1|A|A|1815
9PGM|1|A|G|1816
Current chains
- Chain A
- 16S mitochondrial rRNA
Nearby chains
- Chain 0
- 39S ribosomal protein L32, mitochondrial
- Chain R
- 39S ribosomal protein L20, mitochondrial
- Chain T
- 39S ribosomal protein L22, mitochondrial
- Chain V
- 39S ribosomal protein L24, mitochondrial
- Chain Y
- 39S ribosomal protein L47, mitochondrial
- Chain c
- 39S ribosomal protein L44, mitochondrial
- Chain d
- 39S ribosomal protein L45, mitochondrial
- Chain i
- 39S ribosomal protein L51, mitochondrial
- Chain n
- Nascent polypeptide
Coloring options: