IL_9PGM_024
3D structure
- PDB id
- 9PGM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- In situ structure of the human mitoribosome in the P-E state from TACO1-knockout cells
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.18 Å
Loop
- Sequence
- GCCCA*UACCCUCAC
- Length
- 14 nucleotides
- Bulged bases
- 9PGM|1|A|C|2414, 9PGM|1|A|C|2415, 9PGM|1|A|U|2416, 9PGM|1|A|C|2417
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9PGM|1|A|G|2377
9PGM|1|A|C|2378
9PGM|1|A|C|2379
9PGM|1|A|C|2380
9PGM|1|A|A|2381
*
9PGM|1|A|U|2411
9PGM|1|A|A|2412
9PGM|1|A|C|2413
9PGM|1|A|C|2414
9PGM|1|A|C|2415
9PGM|1|A|U|2416
9PGM|1|A|C|2417
9PGM|1|A|A|2418
9PGM|1|A|C|2419
Current chains
- Chain A
- 16S mitochondrial rRNA
Nearby chains
- Chain 5
- 39S ribosomal protein L37, mitochondrial
- Chain 9
- 39S ribosomal protein L41, mitochondrial
- Chain U
- 39S ribosomal protein L23, mitochondrial
- Chain s
- 39S ribosomal protein S30, mitochondrial
Coloring options: