IL_9PGM_031
3D structure
- PDB id
- 9PGM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- In situ structure of the human mitoribosome in the P-E state from TACO1-knockout cells
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.18 Å
Loop
- Sequence
- GCAAAUCUUA*UUCAGC
- Length
- 16 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9PGM|1|A|G|2478
9PGM|1|A|C|2479
9PGM|1|A|A|2480
9PGM|1|A|A|2481
9PGM|1|A|A|2482
9PGM|1|A|U|2483
9PGM|1|A|C|2484
9PGM|1|A|U|2485
9PGM|1|A|U|2486
9PGM|1|A|A|2487
*
9PGM|1|A|U|2648
9PGM|1|A|U|2649
9PGM|1|A|C|2650
9PGM|1|A|A|2651
9PGM|1|A|G|2652
9PGM|1|A|C|2653
Current chains
- Chain A
- 16S mitochondrial rRNA
Nearby chains
- Chain AA
- Small subunit ribosomal RNA; SSU rRNA
- Chain E
- 39S ribosomal protein L3, mitochondrial
- Chain L
- 39S ribosomal protein L14, mitochondrial
- Chain Q
- 39S ribosomal protein L19, mitochondrial
Coloring options: