IL_9PGM_042

3D structure

PDB id

9PGM (explore in PDB, NAKB, or RNA 3D Hub)

Description

In situ structure of the human mitoribosome in the P-E state from TACO1-knockout cells

Experimental method

ELECTRON MICROSCOPY

Resolution

3.18 Å

Loop

Sequence

AAACAG*CCAAACCU

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9PGM|1|A|A|2753
9PGM|1|A|A|2754
9PGM|1|A|A|2755
9PGM|1|A|C|2756
9PGM|1|A|A|2757
9PGM|1|A|G|2758
*
9PGM|1|A|C|2788
9PGM|1|A|C|2789
9PGM|1|A|A|2790
9PGM|1|A|A|2791
9PGM|1|A|A|2792
9PGM|1|A|C|2793
9PGM|1|A|C|2794
9PGM|1|A|U|2795

Current chains

Chain A

16S mitochondrial rRNA

Nearby chains

Chain H

39S ribosomal protein L9, mitochondrial

Chain X

39S ribosomal protein L28, mitochondrial