IL_9PIJ_137

3D structure

PDB id

9PIJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome bound to Minocycline

Experimental method

ELECTRON MICROSCOPY

Resolution

2.2 Å

Loop

Sequence

UUAAUUGAUG*UUGAUCGAAG

Length

20 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9PIJ|1|a|U|1851
9PIJ|1|a|U|1852
9PIJ|1|a|A|1853
9PIJ|1|a|A|1854
9PIJ|1|a|U|1855
9PIJ|1|a|U|1856
9PIJ|1|a|G|1857
9PIJ|1|a|A|1858
9PIJ|1|a|U|1859
9PIJ|1|a|G|1860
*
9PIJ|1|a|U|1882
9PIJ|1|a|U|1883
9PIJ|1|a|G|1884
9PIJ|1|a|A|1885
9PIJ|1|a|U|1886
9PIJ|1|a|C|1887
9PIJ|1|a|G|1888
9PIJ|1|a|A|1889
9PIJ|1|a|A|1890
9PIJ|1|a|G|1891

Current chains

Chain a

23S rRNA

Nearby chains