IL_9PJ8_048
3D structure
- PDB id
- 9PJ8 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- C. acnes 70S ribosome bound to Sarecycline
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.5 Å
Loop
- Sequence
- UGCAU*AUG
- Length
- 8 nucleotides
- Bulged bases
- 9PJ8|1|A|C|1039
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9PJ8_048 not in the Motif Atlas
- Homologous match to IL_6CZR_154
- Geometric discrepancy: 0.2793
- The information below is about IL_6CZR_154
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_76319.4
- Basepair signature
- cWW-L-R-L-cWW
- Number of instances in this motif group
- 4
Unit IDs
9PJ8|1|A|U|1037
9PJ8|1|A|G|1038
9PJ8|1|A|C|1039
9PJ8|1|A|A|1040
9PJ8|1|A|U|1041
*
9PJ8|1|A|A|1190
9PJ8|1|A|U|1191
9PJ8|1|A|G|1192
Current chains
- Chain A
- 16S rRNA
Nearby chains
- Chain G
- 30S ribosomal protein S3
- Chain M
- Small ribosomal subunit protein uS10
- Chain S
- 30S ribosomal protein S14 type Z
- Chain Y
- mRNA 32MF
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