IL_9PJ8_081

3D structure

PDB id

9PJ8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

C. acnes 70S ribosome bound to Sarecycline

Experimental method

ELECTRON MICROSCOPY

Resolution

2.5 Å

Loop

Sequence

UUGCGUGAAG*UGUAAGCGUGGCA

Length

23 nucleotides

Bulged bases

9PJ8|1|a|C|434

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9PJ8|1|a|U|371
9PJ8|1|a|U|372
9PJ8|1|a|G|373
9PJ8|1|a|C|374
9PJ8|1|a|G|375
9PJ8|1|a|U|376
9PJ8|1|a|G|377
9PJ8|1|a|A|378
9PJ8|1|a|A|379
9PJ8|1|a|G|380
*
9PJ8|1|a|U|428
9PJ8|1|a|G|429
9PJ8|1|a|U|430
9PJ8|1|a|A|431
9PJ8|1|a|A|432
9PJ8|1|a|G|433
9PJ8|1|a|C|434
9PJ8|1|a|G|435
9PJ8|1|a|U|436
9PJ8|1|a|G|437
9PJ8|1|a|G|438
9PJ8|1|a|C|439
9PJ8|1|a|A|440

Current chains

Chain a

23S rRNA

Nearby chains

Chain t

Large ribosomal subunit protein uL24