3D structure

PDB id
9PJ8 (explore in PDB, NAKB, or RNA 3D Hub)
Description
C. acnes 70S ribosome bound to Sarecycline
Experimental method
ELECTRON MICROSCOPY
Resolution
2.5 Å

Loop

Sequence
CGUGCA*UGGUG
Length
11 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9PJ8|1|a|C|1902
9PJ8|1|a|G|1903
9PJ8|1|a|U|1904
9PJ8|1|a|G|1905
9PJ8|1|a|C|1906
9PJ8|1|a|A|1907
*
9PJ8|1|a|U|1919
9PJ8|1|a|G|1920
9PJ8|1|a|G|1921
9PJ8|1|a|U|1922
9PJ8|1|a|G|1923

Current chains

Chain a
23S rRNA

Nearby chains

No other chains within 10Å

Coloring options:

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