IL_9PJ8_153

3D structure

PDB id

9PJ8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

C. acnes 70S ribosome bound to Sarecycline

Experimental method

ELECTRON MICROSCOPY

Resolution

2.5 Å

Loop

Sequence

ACGG*CCUAU

Length

9 nucleotides

Bulged bases

9PJ8|1|a|C|2238, 9PJ8|1|a|U|2795, 9PJ8|1|a|A|2796

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9PJ8|1|a|A|2237
9PJ8|1|a|C|2238
9PJ8|1|a|G|2239
9PJ8|1|a|G|2240
*
9PJ8|1|a|C|2793
9PJ8|1|a|C|2794
9PJ8|1|a|U|2795
9PJ8|1|a|A|2796
9PJ8|1|a|U|2797

Current chains

Chain a

23S rRNA

Nearby chains

Chain d

50S ribosomal protein L3

Chain r

50S ribosomal protein L22

Chain z

50S ribosomal protein L32