IL_9PJ9_018
3D structure
- PDB id
- 9PJ9 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- C. acnes 70S ribosome bound to Minocycline
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.5 Å
Loop
- Sequence
- GGAUGACG*UGUAAAC
- Length
- 15 nucleotides
- Bulged bases
- 9PJ9|1|A|U|414
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9PJ9_018 not in the Motif Atlas
- Geometric match to IL_4LFB_017
- Geometric discrepancy: 0.1367
- The information below is about IL_4LFB_017
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_62329.1
- Basepair signature
- cWW-tSH-tWH-cWH-L-tHW-tSS-tHH-cWW
- Number of instances in this motif group
- 2
Unit IDs
9PJ9|1|A|G|411
9PJ9|1|A|G|412
9PJ9|1|A|A|413
9PJ9|1|A|U|414
9PJ9|1|A|G|415
9PJ9|1|A|A|416
9PJ9|1|A|C|417
9PJ9|1|A|G|418
*
9PJ9|1|A|U|429
9PJ9|1|A|G|430
9PJ9|1|A|U|431
9PJ9|1|A|A|432
9PJ9|1|A|A|433
9PJ9|1|A|A|434
9PJ9|1|A|C|435
Current chains
- Chain A
- 16S rRNA
Nearby chains
- Chain D
- 30S ribosomal protein S4
Coloring options: