IL_9PJ9_102
3D structure
- PDB id
- 9PJ9 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- C. acnes 70S ribosome bound to Minocycline
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.5 Å
Loop
- Sequence
- UCUAG*CGAAA
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9PJ9_102 not in the Motif Atlas
- Geometric match to IL_9H3G_004
- Geometric discrepancy: 0.1138
- The information below is about IL_9H3G_004
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_87767.3
- Basepair signature
- cWW-L-R-tSH-tHS-cWW
- Number of instances in this motif group
- 18
Unit IDs
9PJ9|1|a|U|960
9PJ9|1|a|C|961
9PJ9|1|a|U|962
9PJ9|1|a|A|963
9PJ9|1|a|G|964
*
9PJ9|1|a|C|982
9PJ9|1|a|G|983
9PJ9|1|a|A|984
9PJ9|1|a|A|985
9PJ9|1|a|A|986
Current chains
- Chain a
- 23S rRNA
Nearby chains
- Chain l
- 50S ribosomal protein L16
- Chain u
- 50S ribosomal protein L25
Coloring options: