IL_9PKB_112
3D structure
- PDB id
- 9PKB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- In situ HHT and CHX treated human hibernating state 80S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.05 Å
Loop
- Sequence
- GGGUC*GGCGCCUAGC
- Length
- 15 nucleotides
- Bulged bases
- 9PKB|1|L5|G|2903, 9PKB|1|L5|U|3595, 9PKB|1|L5|A|3596
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9PKB|1|L5|G|2901
9PKB|1|L5|G|2902
9PKB|1|L5|G|2903
9PKB|1|L5|U|2904
9PKB|1|L5|C|2905
*
9PKB|1|L5|G|3589
9PKB|1|L5|G|3590
9PKB|1|L5|C|3591
9PKB|1|L5|G|3592
9PKB|1|L5|C|3593
9PKB|1|L5|C|3594
9PKB|1|L5|U|3595
9PKB|1|L5|A|3596
9PKB|1|L5|G|3597
9PKB|1|L5|C|3598
Current chains
- Chain L5
- 28S rRNA
Nearby chains
- Chain LR
- 60S ribosomal protein L19
- Chain SL
- 40S ribosomal protein S11
Coloring options: