3D structure

PDB id
9PRA (explore in PDB, NAKB, or RNA 3D Hub)
Description
In Situ Structure of the Human Mitoribosome Large Subunit 39S in Complex with EF-Tu
Experimental method
ELECTRON MICROSCOPY
Resolution
2.83 Å

Loop

Sequence
AUCUACAAUCAACCAAC*GUCAUU
Length
23 nucleotides
Bulged bases
9PRA|1|A|C|2393, 9PRA|1|A|A|2406
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9PRA|1|A|A|2384
9PRA|1|A|U|2385
9PRA|1|A|C|2386
9PRA|1|A|U|2387
9PRA|1|A|A|2388
9PRA|1|A|C|2389
9PRA|1|A|A|2390
9PRA|1|A|A|2391
9PRA|1|A|U|2392
9PRA|1|A|C|2393
9PRA|1|A|A|2394
9PRA|1|A|A|2395
9PRA|1|A|C|2396
9PRA|1|A|C|2397
9PRA|1|A|A|2398
9PRA|1|A|A|2399
9PRA|1|A|C|2400
*
9PRA|1|A|G|2403
9PRA|1|A|U|2404
9PRA|1|A|C|2405
9PRA|1|A|A|2406
9PRA|1|A|U|2407
9PRA|1|A|U|2408

Current chains

Chain A
16S mitochondrial rRNA

Nearby chains

Chain 5
39S ribosomal protein L37, mitochondrial
Chain D
39S ribosomal protein L2, mitochondrial
Chain s
39S ribosomal protein S30, mitochondrial

Coloring options:

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