3D structure

PDB id
9PRA (explore in PDB, NAKB, or RNA 3D Hub)
Description
In Situ Structure of the Human Mitoribosome Large Subunit 39S in Complex with EF-Tu
Experimental method
ELECTRON MICROSCOPY
Resolution
2.83 Å

Loop

Sequence
CAUAAUCACUUG*CCUG
Length
16 nucleotides
Bulged bases
9PRA|1|A|A|2601, 9PRA|1|A|U|2607, 9PRA|1|A|U|2626
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9PRA|1|A|C|2597
9PRA|1|A|A|2598
9PRA|1|A|U|2599
9PRA|1|A|A|2600
9PRA|1|A|A|2601
9PRA|1|A|U|2602
9PRA|1|A|C|2603
9PRA|1|A|A|2604
9PRA|1|A|C|2605
9PRA|1|A|U|2606
9PRA|1|A|U|2607
9PRA|1|A|G|2608
*
9PRA|1|A|C|2624
9PRA|1|A|C|2625
9PRA|1|A|U|2626
9PRA|1|A|G|2627

Current chains

Chain A
16S mitochondrial rRNA

Nearby chains

No other chains within 10Å

Coloring options:

Copyright 2026 BGSU RNA group. Database contents are licensed under Creative Commons Attribution 4.0 International (CC BY 4.0). Page generated in 0.185 s