IL_9PRD_022

3D structure

PDB id

9PRD (explore in PDB, NAKB, or RNA 3D Hub)

Description

In situ structure of the human mitoribosome in the P state from TACO1-knockout cells

Experimental method

ELECTRON MICROSCOPY

Resolution

3.31 Å

Loop

Sequence

UCCG*CUCAUAA

Length

11 nucleotides

Bulged bases

9PRD|1|A|C|2331, 9PRD|1|A|A|2446

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9PRD|1|A|U|2330
9PRD|1|A|C|2331
9PRD|1|A|C|2332
9PRD|1|A|G|2333
*
9PRD|1|A|C|2441
9PRD|1|A|U|2442
9PRD|1|A|C|2443
9PRD|1|A|A|2444
9PRD|1|A|U|2445
9PRD|1|A|A|2446
9PRD|1|A|A|2447

Current chains

Chain A

16S mitochondrial rRNA

Nearby chains

Chain s

39S ribosomal protein S30, mitochondrial