IL_9PRD_036
3D structure
- PDB id
- 9PRD (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- In situ structure of the human mitoribosome in the P state from TACO1-knockout cells
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.31 Å
Loop
- Sequence
- CAUAAUCACUUG*CCUG
- Length
- 16 nucleotides
- Bulged bases
- 9PRD|1|A|A|2601, 9PRD|1|A|U|2607, 9PRD|1|A|U|2626
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9PRD|1|A|C|2597
9PRD|1|A|A|2598
9PRD|1|A|U|2599
9PRD|1|A|A|2600
9PRD|1|A|A|2601
9PRD|1|A|U|2602
9PRD|1|A|C|2603
9PRD|1|A|A|2604
9PRD|1|A|C|2605
9PRD|1|A|U|2606
9PRD|1|A|U|2607
9PRD|1|A|G|2608
*
9PRD|1|A|C|2624
9PRD|1|A|C|2625
9PRD|1|A|U|2626
9PRD|1|A|G|2627
Current chains
- Chain A
- 16S mitochondrial rRNA
Nearby chains
- Chain A3
- Aurora kinase A-interacting protein
- Chain AA
- Small subunit ribosomal RNA; SSU rRNA
Coloring options: