IL_9PRD_044
3D structure
- PDB id
- 9PRD (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- In situ structure of the human mitoribosome in the P state from TACO1-knockout cells
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.31 Å
Loop
- Sequence
- GUACAUG*CGAACUACUAUAC
- Length
- 20 nucleotides
- Bulged bases
- 9PRD|1|A|U|2882, 9PRD|1|A|A|2883, 9PRD|1|A|U|2885, 9PRD|1|A|A|2888
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9PRD|1|A|G|2849
9PRD|1|A|U|2850
9PRD|1|A|A|2851
9PRD|1|A|C|2852
9PRD|1|A|A|2853
9PRD|1|A|U|2854
9PRD|1|A|G|2855
*
9PRD|1|A|C|2877
9PRD|1|A|G|2878
9PRD|1|A|A|2879
9PRD|1|A|A|2880
9PRD|1|A|C|2881
9PRD|1|A|U|2882
9PRD|1|A|A|2883
9PRD|1|A|C|2884
9PRD|1|A|U|2885
9PRD|1|A|A|2886
9PRD|1|A|U|2887
9PRD|1|A|A|2888
9PRD|1|A|C|2889
Current chains
- Chain A
- 16S mitochondrial rRNA
Nearby chains
- Chain 1
- 39S ribosomal protein L33, mitochondrial
- Chain 3
- 39S ribosomal protein L35, mitochondrial
- Chain P
- 39S ribosomal protein L18, mitochondrial
- Chain W
- 39S ribosomal protein L27, mitochondrial
- Chain p
- Peptidyl-tRNA hydrolase ICT1, mitochondrial
- Chain q
- Growth arrest and DNA damage-inducible proteins-interacting protein 1
Coloring options: