IL_9PRQ_044

3D structure

PDB id

9PRQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

In situ structure of human mitoribosome in the A/T-P state from TACO1-knockout cells

Experimental method

ELECTRON MICROSCOPY

Resolution

3.34 Å

Loop

Sequence

UACCUAACAAA*UCCUAAACUA

Length

21 nucleotides

Bulged bases

9PRQ|1|A|C|2762, 9PRQ|1|A|U|2763, 9PRQ|1|A|A|2764, 9PRQ|1|A|A|2767, 9PRQ|1|A|U|2781, 9PRQ|1|A|A|2782

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9PRQ|1|A|U|2759
9PRQ|1|A|A|2760
9PRQ|1|A|C|2761
9PRQ|1|A|C|2762
9PRQ|1|A|U|2763
9PRQ|1|A|A|2764
9PRQ|1|A|A|2765
9PRQ|1|A|C|2766
9PRQ|1|A|A|2767
9PRQ|1|A|A|2768
9PRQ|1|A|A|2769
*
9PRQ|1|A|U|2778
9PRQ|1|A|C|2779
9PRQ|1|A|C|2780
9PRQ|1|A|U|2781
9PRQ|1|A|A|2782
9PRQ|1|A|A|2783
9PRQ|1|A|A|2784
9PRQ|1|A|C|2785
9PRQ|1|A|U|2786
9PRQ|1|A|A|2787

Current chains

Chain A

16S mitochondrial rRNA

Nearby chains

Chain H

39S ribosomal protein L9, mitochondrial