IL_9PRQ_048
3D structure
- PDB id
- 9PRQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- In situ structure of human mitoribosome in the A/T-P state from TACO1-knockout cells
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.34 Å
Loop
- Sequence
- GC*GAC
- Length
- 5 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9PRQ_048 not in the Motif Atlas
- Homologous match to IL_7A0S_084
- Geometric discrepancy: 0.1908
- The information below is about IL_7A0S_084
- Detailed Annotation
- Major groove platform
- Broad Annotation
- No text annotation
- Motif group
- IL_48076.8
- Basepair signature
- cWW-cSH-cWW
- Number of instances in this motif group
- 43
Unit IDs
9PRQ|1|A|G|2941
9PRQ|1|A|C|2942
*
9PRQ|1|A|G|2983
9PRQ|1|A|A|2984
9PRQ|1|A|C|2985
Current chains
- Chain A
- 16S mitochondrial rRNA
Nearby chains
- Chain E
- 39S ribosomal protein L3, mitochondrial
- Chain N
- 39S ribosomal protein L16, mitochondrial
- Chain W
- 39S ribosomal protein L27, mitochondrial
- Chain o
- Ribosomal protein 63, mitochondrial
Coloring options: