IL_9PRQ_093

3D structure

PDB id

9PRQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

In situ structure of human mitoribosome in the A/T-P state from TACO1-knockout cells

Experimental method

ELECTRON MICROSCOPY

Resolution

3.34 Å

Loop

Sequence

CUUGCUCAG*CCCAUG

Length

15 nucleotides

Bulged bases

9PRQ|1|AA|U|1246, 9PRQ|1|AA|C|1250, 9PRQ|1|AA|U|1344

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9PRQ|1|AA|C|1244
9PRQ|1|AA|U|1245
9PRQ|1|AA|U|1246
9PRQ|1|AA|G|1247
9PRQ|1|AA|C|1248
9PRQ|1|AA|U|1249
9PRQ|1|AA|C|1250
9PRQ|1|AA|A|1251
9PRQ|1|AA|G|1252
*
9PRQ|1|AA|C|1340
9PRQ|1|AA|C|1341
9PRQ|1|AA|C|1342
9PRQ|1|AA|A|1343
9PRQ|1|AA|U|1344
9PRQ|1|AA|G|1345

Current chains

Chain AA

12S mitochondrial rRNA

Nearby chains

Chain AD

28S ribosomal protein S5, mitochondrial

Chain AK

28S ribosomal protein S14, mitochondrial

Chain AZ

28S ribosomal protein S33, mitochondrial