IL_9PRX_042

3D structure

PDB id

9PRX (explore in PDB, NAKB, or RNA 3D Hub)

Description

In situ structure of the human mitoribosome in the A-P state from TACO1-knockout cells

Experimental method

ELECTRON MICROSCOPY

Resolution

3.23 Å

Loop

Sequence

UACCUAACAAA*UCCUAAACUA

Length

21 nucleotides

Bulged bases

9PRX|1|A|C|2762, 9PRX|1|A|U|2763, 9PRX|1|A|A|2764, 9PRX|1|A|A|2767, 9PRX|1|A|C|2780, 9PRX|1|A|U|2781, 9PRX|1|A|A|2782

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9PRX|1|A|U|2759
9PRX|1|A|A|2760
9PRX|1|A|C|2761
9PRX|1|A|C|2762
9PRX|1|A|U|2763
9PRX|1|A|A|2764
9PRX|1|A|A|2765
9PRX|1|A|C|2766
9PRX|1|A|A|2767
9PRX|1|A|A|2768
9PRX|1|A|A|2769
*
9PRX|1|A|U|2778
9PRX|1|A|C|2779
9PRX|1|A|C|2780
9PRX|1|A|U|2781
9PRX|1|A|A|2782
9PRX|1|A|A|2783
9PRX|1|A|A|2784
9PRX|1|A|C|2785
9PRX|1|A|U|2786
9PRX|1|A|A|2787

Current chains

Chain A

16S mitochondrial rRNA

Nearby chains

Chain H

39S ribosomal protein L9, mitochondrial