IL_9PRX_079

3D structure

PDB id

9PRX (explore in PDB, NAKB, or RNA 3D Hub)

Description

In situ structure of the human mitoribosome in the A-P state from TACO1-knockout cells

Experimental method

ELECTRON MICROSCOPY

Resolution

3.23 Å

Loop

Sequence

UAAAACU*ACACAAA

Length

14 nucleotides

Bulged bases

9PRX|1|AA|C|1011

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9PRX|1|AA|U|974
9PRX|1|AA|A|975
9PRX|1|AA|A|976
9PRX|1|AA|A|977
9PRX|1|AA|A|978
9PRX|1|AA|C|979
9PRX|1|AA|U|980
*
9PRX|1|AA|A|1008
9PRX|1|AA|C|1009
9PRX|1|AA|A|1010
9PRX|1|AA|C|1011
9PRX|1|AA|A|1012
9PRX|1|AA|A|1013
9PRX|1|AA|A|1014

Current chains

Chain AA

12S mitochondrial rRNA

Nearby chains

Chain AE

28S ribosomal protein S6, mitochondrial

Chain AI

28S ribosomal protein S11, mitochondrial

Chain AP

28S ribosomal protein S18c, mitochondrial

Chain AQ

Small ribosomal subunit protein bS21m