IL_9PRX_082
3D structure
- PDB id
- 9PRX (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- In situ structure of the human mitoribosome in the A-P state from TACO1-knockout cells
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.23 Å
Loop
- Sequence
- CUA*UG
- Length
- 5 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9PRX_082 not in the Motif Atlas
- Geometric match to IL_3WBM_004
- Geometric discrepancy: 0.3809
- The information below is about IL_3WBM_004
- Detailed Annotation
- Other IL
- Broad Annotation
- Other IL
- Motif group
- IL_18188.1
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 2
Unit IDs
9PRX|1|AA|C|1020
9PRX|1|AA|U|1021
9PRX|1|AA|A|1022
*
9PRX|1|AA|U|1029
9PRX|1|AA|G|1030
Current chains
- Chain AA
- 12S mitochondrial rRNA
Nearby chains
- Chain A2
- Small ribosomal subunit protein mS37
- Chain AE
- 28S ribosomal protein S6, mitochondrial
- Chain AI
- 28S ribosomal protein S11, mitochondrial
- Chain AP
- 28S ribosomal protein S18c, mitochondrial
- Chain AQ
- Small ribosomal subunit protein bS21m
Coloring options: