IL_9PRX_089

3D structure

PDB id

9PRX (explore in PDB, NAKB, or RNA 3D Hub)

Description

In situ structure of the human mitoribosome in the A-P state from TACO1-knockout cells

Experimental method

ELECTRON MICROSCOPY

Resolution

3.23 Å

Loop

Sequence

AUAUC*GCCCU

Length

10 nucleotides

Bulged bases

9PRX|1|AA|U|1187

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9PRX|1|AA|A|1186
9PRX|1|AA|U|1187
9PRX|1|AA|A|1188
9PRX|1|AA|U|1189
9PRX|1|AA|C|1190
*
9PRX|1|AA|G|1464
9PRX|1|AA|C|1465
9PRX|1|AA|C|1466
9PRX|1|AA|C|1467
9PRX|1|AA|U|1468

Current chains

Chain AA

12S mitochondrial rRNA

Nearby chains

Chain A2

Small ribosomal subunit protein mS37

Chain AF

28S ribosomal protein S7, mitochondrial

Chain AG

28S ribosomal protein S9, mitochondrial

Chain Az

mRNA