IL_9PRX_100
3D structure
- PDB id
- 9PRX (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- In situ structure of the human mitoribosome in the A-P state from TACO1-knockout cells
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.23 Å
Loop
- Sequence
- CCG*CAUG
- Length
- 7 nucleotides
- Bulged bases
- 9PRX|1|AA|C|1484, 9PRX|1|AA|U|1568
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9PRX_100 not in the Motif Atlas
- Homologous match to IL_6CZR_165
- Geometric discrepancy: 0.1404
- The information below is about IL_6CZR_165
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_61438.3
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 5
Unit IDs
9PRX|1|AA|C|1483
9PRX|1|AA|C|1484
9PRX|1|AA|G|1485
*
9PRX|1|AA|C|1566
9PRX|1|AA|A|1567
9PRX|1|AA|U|1568
9PRX|1|AA|G|1569
Current chains
- Chain AA
- 12S mitochondrial rRNA
Nearby chains
- Chain 8
- 39S ribosomal protein L40, mitochondrial
- Chain A3
- Aurora kinase A-interacting protein
- Chain Ax
- P/P-tRNA
- Chain Az
- mRNA
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