IL_9PS0_021

3D structure

PDB id

9PS0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

In situ structure of the human mitoribosome in the A/P-P/E state from TACO1-knockout cells

Experimental method

ELECTRON MICROSCOPY

Resolution

3.29 Å

Loop

Sequence

CUCCG*CUCAUAAG

Length

13 nucleotides

Bulged bases

9PS0|1|A|C|2331, 9PS0|1|A|A|2446

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9PS0|1|A|C|2329
9PS0|1|A|U|2330
9PS0|1|A|C|2331
9PS0|1|A|C|2332
9PS0|1|A|G|2333
*
9PS0|1|A|C|2441
9PS0|1|A|U|2442
9PS0|1|A|C|2443
9PS0|1|A|A|2444
9PS0|1|A|U|2445
9PS0|1|A|A|2446
9PS0|1|A|A|2447
9PS0|1|A|G|2448

Current chains

Chain A

16S mitochondrial rRNA

Nearby chains

Chain O

39S ribosomal protein L17, mitochondrial

Chain s

39S ribosomal protein S30, mitochondrial