IL_9PS0_042

3D structure

PDB id

9PS0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

In situ structure of the human mitoribosome in the A/P-P/E state from TACO1-knockout cells

Experimental method

ELECTRON MICROSCOPY

Resolution

3.29 Å

Loop

Sequence

UACCUAACAAAC*GUCCUAAACUA

Length

23 nucleotides

Bulged bases

9PS0|1|A|C|2762, 9PS0|1|A|U|2763, 9PS0|1|A|A|2764, 9PS0|1|A|A|2767, 9PS0|1|A|C|2780, 9PS0|1|A|U|2781, 9PS0|1|A|A|2782

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9PS0|1|A|U|2759
9PS0|1|A|A|2760
9PS0|1|A|C|2761
9PS0|1|A|C|2762
9PS0|1|A|U|2763
9PS0|1|A|A|2764
9PS0|1|A|A|2765
9PS0|1|A|C|2766
9PS0|1|A|A|2767
9PS0|1|A|A|2768
9PS0|1|A|A|2769
9PS0|1|A|C|2770
*
9PS0|1|A|G|2777
9PS0|1|A|U|2778
9PS0|1|A|C|2779
9PS0|1|A|C|2780
9PS0|1|A|U|2781
9PS0|1|A|A|2782
9PS0|1|A|A|2783
9PS0|1|A|A|2784
9PS0|1|A|C|2785
9PS0|1|A|U|2786
9PS0|1|A|A|2787

Current chains

Chain A

16S mitochondrial rRNA

Nearby chains

Chain H

39S ribosomal protein L9, mitochondrial

Chain z

Large ribosomal subunit protein uL1m